Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Gm30025-201ENSMUST00000218555 728 ntBASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc9Q8VC31 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc9Q8VC31 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc9Q8VC31 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Gm42480-201ENSMUST00000198434 2595 ntBASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Gm25925-201ENSMUST00000158314 306 ntBASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc9Q8VC31 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms