Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup35Q8R4R6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup35Q8R4R6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Gm15372-201ENSMUST00000120729 834 ntBASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup35Q8R4R6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms