Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm9794-201ENSMUST00000202370 423 ntBASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.77■□□□□ 0.6
Chmp7Q8R1T1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Chmp7Q8R1T1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chmp7Q8R1T1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chmp7Q8R1T1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.77■□□□□ 0.59
Chmp7Q8R1T1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Chmp7Q8R1T1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chmp7Q8R1T1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp7Q8R1T1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Gm9229-201ENSMUST00000222777 126 ntBASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp7Q8R1T1 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp7Q8R1T1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms