Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.37■□□□□ 0.37
Atf7Q8R0S1 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.37■□□□□ 0.37
Atf7Q8R0S1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.37■□□□□ 0.37
Atf7Q8R0S1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf7Q8R0S1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Mir3113-201ENSMUST00000175478 76 ntBASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf7Q8R0S1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Gm15427-201ENSMUST00000117288 531 ntBASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Rpph1-201ENSMUST00000175096 319 ntBASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf7Q8R0S1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Gm11779-201ENSMUST00000118541 368 ntBASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 AW822252-206ENSMUST00000208904 237 ntBASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms