Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.28□□□□□ -0.92
Cystm1Q8K353 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cystm1Q8K353 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cystm1Q8K353 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Birc2-201ENSMUST00000054878 378 ntBASIC9.27□□□□□ -0.93
Cystm1Q8K353 Spr-ps1-201ENSMUST00000089584 605 ntBASIC9.27□□□□□ -0.93
Cystm1Q8K353 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Gm44443-201ENSMUST00000204396 5633 ntBASIC9.27□□□□□ -0.93
Cystm1Q8K353 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.27□□□□□ -0.93
Cystm1Q8K353 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cystm1Q8K353 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Gm8784-201ENSMUST00000222096 1435 ntBASIC9.26□□□□□ -0.93
Cystm1Q8K353 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Gm13312-201ENSMUST00000119631 718 ntBASIC9.26□□□□□ -0.93
Cystm1Q8K353 Olfr129-201ENSMUST00000122318 993 ntBASIC9.26□□□□□ -0.93
Cystm1Q8K353 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms