Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Gm18489-201ENSMUST00000172565 551 ntBASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 AV026068-213ENSMUST00000223675 1171 ntBASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc47a1Q8K0H1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Gm8000-201ENSMUST00000188378 592 ntBASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Gm2213-201ENSMUST00000197485 688 ntBASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc47a1Q8K0H1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Gm11764-201ENSMUST00000120221 623 ntBASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Gm12350-201ENSMUST00000121208 462 ntBASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc47a1Q8K0H1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms