Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Rps4l-201ENSMUST00000071745 943 ntBASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Calcoco1Q8CGU1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Calcoco1Q8CGU1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Calcoco1Q8CGU1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Calcoco1Q8CGU1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Gm4459-201ENSMUST00000118750 468 ntBASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Gm12497-201ENSMUST00000138778 237 ntBASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Gm9172-201ENSMUST00000212092 954 ntBASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Gm6296-201ENSMUST00000222599 943 ntBASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Calcoco1Q8CGU1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Gm6376-201ENSMUST00000209407 580 ntBASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms