Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd4Q8CC84 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd4Q8CC84 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Gm11780-201ENSMUST00000136880 516 ntBASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Gm18489-201ENSMUST00000172565 551 ntBASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms