Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Gm45747-201ENSMUST00000212203 999 ntBASIC16.09■□□□□ 0.17
Lin9Q8C735 Thap2-203ENSMUST00000218989 527 ntBASIC16.09■□□□□ 0.17
Lin9Q8C735 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
Lin9Q8C735 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lin9Q8C735 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lin9Q8C735 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Lin9Q8C735 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lin9Q8C735 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Lin9Q8C735 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.08■□□□□ 0.16
Lin9Q8C735 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Lin9Q8C735 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Lin9Q8C735 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Lin9Q8C735 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.08■□□□□ 0.16
Lin9Q8C735 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lin9Q8C735 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Lin9Q8C735 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.07■□□□□ 0.16
Lin9Q8C735 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.07■□□□□ 0.16
Lin9Q8C735 Gm44872-201ENSMUST00000207864 420 ntBASIC16.07■□□□□ 0.16
Lin9Q8C735 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.07■□□□□ 0.16
Lin9Q8C735 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.07■□□□□ 0.16
Lin9Q8C735 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Lin9Q8C735 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Lin9Q8C735 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lin9Q8C735 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Lin9Q8C735 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lin9Q8C735 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lin9Q8C735 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lin9Q8C735 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Lin9Q8C735 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.06■□□□□ 0.16
Lin9Q8C735 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.06■□□□□ 0.16
Lin9Q8C735 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lin9Q8C735 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.06■□□□□ 0.16
Lin9Q8C735 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.06■□□□□ 0.16
Lin9Q8C735 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lin9Q8C735 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lin9Q8C735 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lin9Q8C735 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms