Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc90bQ8C3X2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.27□□□□□ -0.12
Ccdc90bQ8C3X2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Gm29518-201ENSMUST00000190858 372 ntBASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc90bQ8C3X2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc90bQ8C3X2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Acot6-202ENSMUST00000222921 3622 ntBASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc90bQ8C3X2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms