Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp44Q8C2S0 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Gm14822-201ENSMUST00000122247 291 ntBASIC17.21■□□□□ 0.35
Usp44Q8C2S0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Chchd1-203ENSMUST00000224633 557 ntBASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.21■□□□□ 0.35
Usp44Q8C2S0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp44Q8C2S0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp44Q8C2S0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp44Q8C2S0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp44Q8C2S0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp44Q8C2S0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Gm18737-201ENSMUST00000173594 937 ntBASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Gm2756-201ENSMUST00000195851 400 ntBASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp44Q8C2S0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Mir6990-201ENSMUST00000183724 91 ntBASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Gm37935-201ENSMUST00000192012 982 ntBASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp44Q8C2S0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms