Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tsen54Q8C2A2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tsen54Q8C2A2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Gm28033-201ENSMUST00000184224 96 ntBASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tsen54Q8C2A2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tsen54Q8C2A2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tsen54Q8C2A2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tsen54Q8C2A2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tsen54Q8C2A2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms