Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3rf3Q8C120 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Thap2-203ENSMUST00000218989 527 ntBASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf3Q8C120 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Gm11779-201ENSMUST00000118541 368 ntBASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Gm12134-201ENSMUST00000122109 520 ntBASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Sh3rf3Q8C120 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3rf3Q8C120 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.33■□□□□ 0.05
Sh3rf3Q8C120 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3rf3Q8C120 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Gm10154-201ENSMUST00000084445 354 ntBASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf3Q8C120 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms