Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.46□□□□□ -0.57
Chd9Q8BYH8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Dancr-204ENSMUST00000132389 2347 ntBASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Gm27514-201ENSMUST00000183692 110 ntBASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd9Q8BYH8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd9Q8BYH8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Gm18307-201ENSMUST00000206864 949 ntBASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Chd9Q8BYH8 Gm14130-201ENSMUST00000118417 987 ntBASIC11.45□□□□□ -0.58
Chd9Q8BYH8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms