Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Gm6283-201ENSMUST00000182369 1000 ntBASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Gm21470-201ENSMUST00000187680 696 ntBASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Gm17795-201ENSMUST00000214505 757 ntBASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.02■□□□□ 0.64
Col16a1Q8BLX7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col16a1Q8BLX7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC19.02■□□□□ 0.63
Col16a1Q8BLX7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Col16a1Q8BLX7 Gm17794-201ENSMUST00000220252 955 ntBASIC19.02■□□□□ 0.63
Col16a1Q8BLX7 Gm10478-201ENSMUST00000084451 396 ntBASIC19.02■□□□□ 0.63
Col16a1Q8BLX7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col16a1Q8BLX7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col16a1Q8BLX7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col16a1Q8BLX7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Gm15198-201ENSMUST00000117283 177 ntBASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Gm44608-201ENSMUST00000206827 855 ntBASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Gm45841-201ENSMUST00000207700 164 ntBASIC19.01■□□□□ 0.63
Col16a1Q8BLX7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Gm16011-201ENSMUST00000121567 2662 ntBASIC19■□□□□ 0.63
Col16a1Q8BLX7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC19■□□□□ 0.63
Col16a1Q8BLX7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Gm9257-201ENSMUST00000221254 232 ntBASIC19■□□□□ 0.63
Col16a1Q8BLX7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col16a1Q8BLX7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col16a1Q8BLX7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms