Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdhr3Q8BL00 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdhr3Q8BL00 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Gm25990-201ENSMUST00000102440 86 ntBASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdhr3Q8BL00 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdhr3Q8BL00 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms