Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmbox1Q8BJA3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmbox1Q8BJA3 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.43□□□□□ -0.1
Hmbox1Q8BJA3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmbox1Q8BJA3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Gm18889-201ENSMUST00000174284 929 ntBASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmbox1Q8BJA3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Gm45747-201ENSMUST00000212203 999 ntBASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmbox1Q8BJA3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Gm13597-201ENSMUST00000121239 375 ntBASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmbox1Q8BJA3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hmbox1Q8BJA3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hmbox1Q8BJA3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmbox1Q8BJA3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmbox1Q8BJA3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hmbox1Q8BJA3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmbox1Q8BJA3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmbox1Q8BJA3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hmbox1Q8BJA3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmbox1Q8BJA3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms