Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Gm25990-201ENSMUST00000102440 86 ntBASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Gm27741-201ENSMUST00000185060 237 ntBASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Gm28659-201ENSMUST00000188013 759 ntBASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Gm5864-201ENSMUST00000202263 970 ntBASIC14.23□□□□□ -0.13
Rnf38Q8BI21 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rnf38Q8BI21 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Gm11452-201ENSMUST00000122376 690 ntBASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf38Q8BI21 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Gm37153-201ENSMUST00000193637 231 ntBASIC14.21□□□□□ -0.13
Rnf38Q8BI21 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf38Q8BI21 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rnf38Q8BI21 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf38Q8BI21 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf38Q8BI21 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf38Q8BI21 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf38Q8BI21 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms