Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Depdc1bQ8BH88 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Gm18246-201ENSMUST00000221023 728 ntBASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Depdc1bQ8BH88 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Depdc1bQ8BH88 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.99■□□□□ 0.15
Depdc1bQ8BH88 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms