Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc5a7Q8BGY9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc5a7Q8BGY9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Slc5a7Q8BGY9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.9□□□□□ -0.35
Slc5a7Q8BGY9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc5a7Q8BGY9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms