Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.99■□□□□ 0.31
Prpf40bQ80W14 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Gm15487-201ENSMUST00000122373 465 ntBASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf40bQ80W14 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Gm14928-201ENSMUST00000120198 477 ntBASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Gm14719-201ENSMUST00000121891 340 ntBASIC16.97■□□□□ 0.31
Prpf40bQ80W14 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Prpf40bQ80W14 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Gm2810-201ENSMUST00000118681 990 ntBASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf40bQ80W14 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms