Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim62Q80V85 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Gm43125-201ENSMUST00000201724 730 ntBASIC15.23■□□□□ 0.03
Trim62Q80V85 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.23■□□□□ 0.03
Trim62Q80V85 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim62Q80V85 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.23■□□□□ 0.03
Trim62Q80V85 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim62Q80V85 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim62Q80V85 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim62Q80V85 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.22■□□□□ 0.03
Trim62Q80V85 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim62Q80V85 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Gm44335-201ENSMUST00000196879 141 ntBASIC15.22■□□□□ 0.03
Trim62Q80V85 Gm44297-201ENSMUST00000198304 141 ntBASIC15.22■□□□□ 0.03
Trim62Q80V85 Gm44346-201ENSMUST00000198851 141 ntBASIC15.22■□□□□ 0.03
Trim62Q80V85 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Gm8396-201ENSMUST00000057361 823 ntBASIC15.22■□□□□ 0.03
Trim62Q80V85 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim62Q80V85 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim62Q80V85 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim62Q80V85 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim62Q80V85 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim62Q80V85 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim62Q80V85 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim62Q80V85 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.21■□□□□ 0.03
Trim62Q80V85 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Trim62Q80V85 Gm5867-201ENSMUST00000063197 592 ntBASIC15.21■□□□□ 0.03
Trim62Q80V85 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim62Q80V85 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.21■□□□□ 0.03
Trim62Q80V85 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim62Q80V85 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim62Q80V85 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim62Q80V85 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim62Q80V85 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim62Q80V85 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim62Q80V85 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.2■□□□□ 0.02
Trim62Q80V85 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms