Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh19Q80TF3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Gm14057-201ENSMUST00000120631 482 ntBASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh19Q80TF3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Gm6415-201ENSMUST00000118488 348 ntBASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms