Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Gm16198-201ENSMUST00000118766 670 ntBASIC14.34□□□□□ -0.11
Scn4bQ7M729 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.34□□□□□ -0.11
Scn4bQ7M729 Gm9727-201ENSMUST00000161387 555 ntBASIC14.34□□□□□ -0.11
Scn4bQ7M729 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.34□□□□□ -0.11
Scn4bQ7M729 Gm10154-201ENSMUST00000084445 354 ntBASIC14.34□□□□□ -0.11
Scn4bQ7M729 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.34□□□□□ -0.11
Scn4bQ7M729 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Gm5177-201ENSMUST00000183092 997 ntBASIC14.33□□□□□ -0.12
Scn4bQ7M729 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.33□□□□□ -0.12
Scn4bQ7M729 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scn4bQ7M729 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.33□□□□□ -0.12
Scn4bQ7M729 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.33□□□□□ -0.12
Scn4bQ7M729 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.32□□□□□ -0.12
Scn4bQ7M729 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.32□□□□□ -0.12
Scn4bQ7M729 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.32□□□□□ -0.12
Scn4bQ7M729 Thap2-203ENSMUST00000218989 527 ntBASIC14.32□□□□□ -0.12
Scn4bQ7M729 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.32□□□□□ -0.12
Scn4bQ7M729 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn4bQ7M729 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms