Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm43818-201ENSMUST00000200605 466 ntBASIC17.47■□□□□ 0.39
Sned1Q70E20 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.47■□□□□ 0.39
Sned1Q70E20 Gm7783-201ENSMUST00000204795 781 ntBASIC17.47■□□□□ 0.39
Sned1Q70E20 Gm45880-201ENSMUST00000213041 853 ntBASIC17.47■□□□□ 0.39
Sned1Q70E20 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sned1Q70E20 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.46■□□□□ 0.39
Sned1Q70E20 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sned1Q70E20 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.46■□□□□ 0.39
Sned1Q70E20 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Gm22331-201ENSMUST00000158066 136 ntBASIC17.46■□□□□ 0.39
Sned1Q70E20 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sned1Q70E20 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Sned1Q70E20 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.46■□□□□ 0.39
Sned1Q70E20 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sned1Q70E20 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sned1Q70E20 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.46■□□□□ 0.38
Sned1Q70E20 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sned1Q70E20 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sned1Q70E20 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sned1Q70E20 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Sned1Q70E20 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sned1Q70E20 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sned1Q70E20 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.45■□□□□ 0.38
Sned1Q70E20 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sned1Q70E20 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.45■□□□□ 0.38
Sned1Q70E20 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sned1Q70E20 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.45■□□□□ 0.38
Sned1Q70E20 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Sned1Q70E20 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.45■□□□□ 0.38
Sned1Q70E20 Gm27516-201ENSMUST00000184237 98 ntBASIC17.45■□□□□ 0.38
Sned1Q70E20 Gm37466-201ENSMUST00000195692 652 ntBASIC17.45■□□□□ 0.38
Sned1Q70E20 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sned1Q70E20 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sned1Q70E20 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.44■□□□□ 0.38
Sned1Q70E20 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.44■□□□□ 0.38
Sned1Q70E20 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Proscos-202ENSMUST00000178990 666 ntBASIC17.44■□□□□ 0.38
Sned1Q70E20 Gm44397-201ENSMUST00000195950 113 ntBASIC17.44■□□□□ 0.38
Sned1Q70E20 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Gm18473-201ENSMUST00000220543 868 ntBASIC17.44■□□□□ 0.38
Sned1Q70E20 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.44■□□□□ 0.38
Sned1Q70E20 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sned1Q70E20 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms