Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Gm43630-201ENSMUST00000201550 776 ntBASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx55Q6ZPL9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Gm12341-201ENSMUST00000119724 503 ntBASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Mir1938-201ENSMUST00000158746 100 ntBASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Gm28911-201ENSMUST00000188837 117 ntBASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ddx55Q6ZPL9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Ddx55Q6ZPL9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 AY702102-202ENSMUST00000194651 1173 ntBASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Ddx55Q6ZPL9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Gm10275-202ENSMUST00000168697 495 ntBASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Gm10275-201ENSMUST00000092620 635 ntBASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx55Q6ZPL9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx55Q6ZPL9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms