Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Kdm3aQ6PCM1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Kdm3aQ6PCM1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kdm3aQ6PCM1 Gm13223-201ENSMUST00000118609 747 ntBASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.42
Kdm3aQ6PCM1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Gm14042-201ENSMUST00000120139 833 ntBASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Gm14767-201ENSMUST00000121559 586 ntBASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Gm27680-201ENSMUST00000184192 160 ntBASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm3aQ6PCM1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm24543-201ENSMUST00000103867 82 ntBASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm10275-202ENSMUST00000168697 495 ntBASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm27533-201ENSMUST00000183800 152 ntBASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm10275-201ENSMUST00000092620 635 ntBASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm3aQ6PCM1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Kdm3aQ6PCM1 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.67■□□□□ 0.42
Kdm3aQ6PCM1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm3aQ6PCM1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm3aQ6PCM1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm3aQ6PCM1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm3aQ6PCM1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm3aQ6PCM1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Kdm3aQ6PCM1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms