Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herc4Q6PAV2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Gm17271-201ENSMUST00000165535 355 ntBASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herc4Q6PAV2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herc4Q6PAV2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc4Q6PAV2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Gm13464-201ENSMUST00000119418 935 ntBASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Herc4Q6PAV2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms