Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Gm10253-201ENSMUST00000194270 940 ntBASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgb4Q6P8W9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gm6973-201ENSMUST00000117080 721 ntBASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gm27430-201ENSMUST00000184585 107 ntBASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gm44333-201ENSMUST00000197168 107 ntBASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gm5779-201ENSMUST00000218467 910 ntBASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Hmgb4Q6P8W9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm22065-201ENSMUST00000103753 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm22066-201ENSMUST00000103761 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm24932-201ENSMUST00000103763 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm24115-201ENSMUST00000103799 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm22190-201ENSMUST00000103827 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm22191-201ENSMUST00000103831 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm24721-201ENSMUST00000103849 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm28018-201ENSMUST00000103869 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm26399-201ENSMUST00000103937 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm25349-201ENSMUST00000177728 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm23616-201ENSMUST00000177797 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm25871-201ENSMUST00000177816 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm24752-201ENSMUST00000178240 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm24496-201ENSMUST00000178287 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm25649-201ENSMUST00000178476 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm25548-201ENSMUST00000178681 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm23147-201ENSMUST00000178841 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm26095-201ENSMUST00000179270 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm22171-201ENSMUST00000179283 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm23936-201ENSMUST00000179354 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm22619-201ENSMUST00000179516 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm25255-201ENSMUST00000179579 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm24755-201ENSMUST00000179691 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm26506-201ENSMUST00000179692 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm25086-201ENSMUST00000179931 110 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms