Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.51■□□□□ 0.23
Abcf1Q6P542 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Gm20614-201ENSMUST00000177106 632 ntBASIC16.5■□□□□ 0.23
Abcf1Q6P542 Gm28196-201ENSMUST00000187719 640 ntBASIC16.5■□□□□ 0.23
Abcf1Q6P542 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcf1Q6P542 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.49■□□□□ 0.23
Abcf1Q6P542 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 AV026068-213ENSMUST00000223675 1171 ntBASIC16.49■□□□□ 0.23
Abcf1Q6P542 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.49■□□□□ 0.23
Abcf1Q6P542 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
Abcf1Q6P542 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcf1Q6P542 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Grk6-207ENSMUST00000225925 2769 ntBASIC16.48■□□□□ 0.23
Abcf1Q6P542 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Mir5126-201ENSMUST00000175513 77 ntBASIC16.48■□□□□ 0.23
Abcf1Q6P542 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms