Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Col11a2Q64739 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a2Q64739 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.5■□□□□ 0.39
Col11a2Q64739 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.5■□□□□ 0.39
Col11a2Q64739 Gm12485-201ENSMUST00000119641 291 ntBASIC17.5■□□□□ 0.39
Col11a2Q64739 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.5■□□□□ 0.39
Col11a2Q64739 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.5■□□□□ 0.39
Col11a2Q64739 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.5■□□□□ 0.39
Col11a2Q64739 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col11a2Q64739 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a2Q64739 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a2Q64739 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a2Q64739 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.49■□□□□ 0.39
Col11a2Q64739 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col11a2Q64739 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col11a2Q64739 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a2Q64739 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a2Q64739 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.49■□□□□ 0.39
Col11a2Q64739 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.49■□□□□ 0.39
Col11a2Q64739 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a2Q64739 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.49■□□□□ 0.39
Col11a2Q64739 Gm27847-201ENSMUST00000183711 107 ntBASIC17.49■□□□□ 0.39
Col11a2Q64739 Gm27375-201ENSMUST00000183799 107 ntBASIC17.49■□□□□ 0.39
Col11a2Q64739 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.49■□□□□ 0.39
Col11a2Q64739 Gm40466-201ENSMUST00000212174 422 ntBASIC17.49■□□□□ 0.39
Col11a2Q64739 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col11a2Q64739 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col11a2Q64739 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col11a2Q64739 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a2Q64739 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.48■□□□□ 0.39
Col11a2Q64739 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col11a2Q64739 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.48■□□□□ 0.39
Col11a2Q64739 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Gm5187-201ENSMUST00000117317 991 ntBASIC17.48■□□□□ 0.39
Col11a2Q64739 Gm13385-201ENSMUST00000121089 220 ntBASIC17.48■□□□□ 0.39
Col11a2Q64739 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.48■□□□□ 0.39
Col11a2Q64739 Gm19184-201ENSMUST00000196798 928 ntBASIC17.48■□□□□ 0.39
Col11a2Q64739 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.48■□□□□ 0.39
Col11a2Q64739 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.48■□□□□ 0.39
Col11a2Q64739 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.48■□□□□ 0.39
Col11a2Q64739 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.48■□□□□ 0.39
Col11a2Q64739 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.48■□□□□ 0.39
Col11a2Q64739 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a2Q64739 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Col11a2Q64739 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.47■□□□□ 0.39
Col11a2Q64739 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.47■□□□□ 0.39
Col11a2Q64739 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Gm44608-201ENSMUST00000206827 855 ntBASIC17.47■□□□□ 0.39
Col11a2Q64739 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.47■□□□□ 0.39
Col11a2Q64739 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col11a2Q64739 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.47■□□□□ 0.39
Col11a2Q64739 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.47■□□□□ 0.39
Col11a2Q64739 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.47■□□□□ 0.39
Col11a2Q64739 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col11a2Q64739 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms