Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SspnQ62147 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SspnQ62147 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
SspnQ62147 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
SspnQ62147 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SspnQ62147 Mir8098-201ENSMUST00000184011 137 ntBASIC12.34□□□□□ -0.43
SspnQ62147 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SspnQ62147 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SspnQ62147 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.34□□□□□ -0.43
SspnQ62147 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
SspnQ62147 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspnQ62147 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SspnQ62147 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SspnQ62147 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SspnQ62147 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.33□□□□□ -0.44
SspnQ62147 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
SspnQ62147 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SspnQ62147 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Gm5864-201ENSMUST00000202263 970 ntBASIC12.33□□□□□ -0.44
SspnQ62147 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SspnQ62147 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.33□□□□□ -0.44
SspnQ62147 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspnQ62147 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SspnQ62147 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SspnQ62147 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.32□□□□□ -0.44
SspnQ62147 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SspnQ62147 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.32□□□□□ -0.44
SspnQ62147 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.32□□□□□ -0.44
SspnQ62147 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.32□□□□□ -0.44
SspnQ62147 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.32□□□□□ -0.44
SspnQ62147 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SspnQ62147 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms