Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.36□□□□□ -0.59
Notch3Q61982 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.36□□□□□ -0.59
Notch3Q61982 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.36□□□□□ -0.59
Notch3Q61982 Gm29541-201ENSMUST00000191351 678 ntBASIC11.36□□□□□ -0.59
Notch3Q61982 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.36□□□□□ -0.59
Notch3Q61982 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Notch3Q61982 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Notch3Q61982 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.36□□□□□ -0.59
Notch3Q61982 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.36□□□□□ -0.59
Notch3Q61982 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.36□□□□□ -0.59
Notch3Q61982 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.36□□□□□ -0.59
Notch3Q61982 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.36□□□□□ -0.59
Notch3Q61982 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Notch3Q61982 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Notch3Q61982 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Notch3Q61982 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Notch3Q61982 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.35□□□□□ -0.59
Notch3Q61982 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Gm6973-201ENSMUST00000117080 721 ntBASIC11.35□□□□□ -0.59
Notch3Q61982 Gm27437-201ENSMUST00000183429 107 ntBASIC11.35□□□□□ -0.59
Notch3Q61982 Gm17837-201ENSMUST00000186435 985 ntBASIC11.35□□□□□ -0.59
Notch3Q61982 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Notch3Q61982 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.35□□□□□ -0.59
Notch3Q61982 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Notch3Q61982 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.35□□□□□ -0.59
Notch3Q61982 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Notch3Q61982 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Notch3Q61982 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Notch3Q61982 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Notch3Q61982 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.34□□□□□ -0.59
Notch3Q61982 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Notch3Q61982 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Notch3Q61982 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Notch3Q61982 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.34□□□□□ -0.59
Notch3Q61982 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Gm27618-201ENSMUST00000183671 60 ntBASIC11.34□□□□□ -0.59
Notch3Q61982 Gm2272-201ENSMUST00000194903 582 ntBASIC11.34□□□□□ -0.59
Notch3Q61982 Gm7653-201ENSMUST00000214567 508 ntBASIC11.34□□□□□ -0.59
Notch3Q61982 Gm25857-201ENSMUST00000082788 129 ntBASIC11.34□□□□□ -0.59
Notch3Q61982 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms