Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.91□□□□□ -0.66
Foxc1Q61572 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.91□□□□□ -0.66
Foxc1Q61572 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.91□□□□□ -0.66
Foxc1Q61572 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.91□□□□□ -0.66
Foxc1Q61572 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.91□□□□□ -0.66
Foxc1Q61572 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.91□□□□□ -0.66
Foxc1Q61572 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.9□□□□□ -0.66
Foxc1Q61572 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Foxc1Q61572 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Foxc1Q61572 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Foxc1Q61572 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Foxc1Q61572 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.9□□□□□ -0.67
Foxc1Q61572 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Foxc1Q61572 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.9□□□□□ -0.67
Foxc1Q61572 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Foxc1Q61572 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Foxc1Q61572 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Foxc1Q61572 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Foxc1Q61572 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.89□□□□□ -0.67
Foxc1Q61572 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.89□□□□□ -0.67
Foxc1Q61572 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Foxc1Q61572 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Foxc1Q61572 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Foxc1Q61572 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Foxc1Q61572 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Foxc1Q61572 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Foxc1Q61572 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms