Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.21■□□□□ 0.18
Ecm1Q61508 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ecm1Q61508 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ecm1Q61508 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ecm1Q61508 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.2■□□□□ 0.18
Ecm1Q61508 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Gm15460-201ENSMUST00000118147 391 ntBASIC16.2■□□□□ 0.18
Ecm1Q61508 Gm15393-201ENSMUST00000120499 219 ntBASIC16.2■□□□□ 0.18
Ecm1Q61508 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ecm1Q61508 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.2■□□□□ 0.18
Ecm1Q61508 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.2■□□□□ 0.18
Ecm1Q61508 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.2■□□□□ 0.18
Ecm1Q61508 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ecm1Q61508 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ecm1Q61508 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Ecm1Q61508 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ecm1Q61508 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.19■□□□□ 0.18
Ecm1Q61508 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.19■□□□□ 0.18
Ecm1Q61508 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Ecm1Q61508 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ecm1Q61508 Mir6392-201ENSMUST00000184924 108 ntBASIC16.19■□□□□ 0.18
Ecm1Q61508 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.19■□□□□ 0.18
Ecm1Q61508 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.19■□□□□ 0.18
Ecm1Q61508 Gm19220-201ENSMUST00000222682 803 ntBASIC16.19■□□□□ 0.18
Ecm1Q61508 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ecm1Q61508 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ecm1Q61508 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.19■□□□□ 0.18
Ecm1Q61508 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ecm1Q61508 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Gm11918-201ENSMUST00000121660 179 ntBASIC16.18■□□□□ 0.18
Ecm1Q61508 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Gm8602-201ENSMUST00000184045 607 ntBASIC16.18■□□□□ 0.18
Ecm1Q61508 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.18■□□□□ 0.18
Ecm1Q61508 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.18■□□□□ 0.18
Ecm1Q61508 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ecm1Q61508 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ecm1Q61508 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ecm1Q61508 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ecm1Q61508 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ecm1Q61508 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms