Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Gm43347-201ENSMUST00000200226 580 ntBASIC16.32■□□□□ 0.2
Ift88Q61371 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.32■□□□□ 0.2
Ift88Q61371 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.32■□□□□ 0.2
Ift88Q61371 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Ift88Q61371 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.31■□□□□ 0.2
Ift88Q61371 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.31■□□□□ 0.2
Ift88Q61371 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.31■□□□□ 0.2
Ift88Q61371 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.31■□□□□ 0.2
Ift88Q61371 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Ift88Q61371 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ift88Q61371 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ift88Q61371 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ift88Q61371 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ift88Q61371 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Ift88Q61371 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Ift88Q61371 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.3■□□□□ 0.2
Ift88Q61371 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Gm11764-201ENSMUST00000120221 623 ntBASIC16.3■□□□□ 0.2
Ift88Q61371 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ift88Q61371 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.3■□□□□ 0.2
Ift88Q61371 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ift88Q61371 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ift88Q61371 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Ift88Q61371 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.29■□□□□ 0.2
Ift88Q61371 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.29■□□□□ 0.2
Ift88Q61371 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.29■□□□□ 0.2
Ift88Q61371 Gm18246-201ENSMUST00000221023 728 ntBASIC16.29■□□□□ 0.2
Ift88Q61371 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Birc2-201ENSMUST00000054878 378 ntBASIC16.29■□□□□ 0.2
Ift88Q61371 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ift88Q61371 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.29■□□□□ 0.2
Ift88Q61371 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ift88Q61371 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Ift88Q61371 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ift88Q61371 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.28■□□□□ 0.2
Ift88Q61371 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms