Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.62□□□□□ -0.39
Clns1aQ61189 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.62□□□□□ -0.39
Clns1aQ61189 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.62□□□□□ -0.39
Clns1aQ61189 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.62□□□□□ -0.39
Clns1aQ61189 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.62□□□□□ -0.39
Clns1aQ61189 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clns1aQ61189 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.61□□□□□ -0.39
Clns1aQ61189 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clns1aQ61189 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Gm13312-201ENSMUST00000119631 718 ntBASIC12.61□□□□□ -0.39
Clns1aQ61189 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clns1aQ61189 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.61□□□□□ -0.39
Clns1aQ61189 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.61□□□□□ -0.39
Clns1aQ61189 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Clns1aQ61189 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.61□□□□□ -0.39
Clns1aQ61189 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clns1aQ61189 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Gm8344-201ENSMUST00000119813 856 ntBASIC12.6□□□□□ -0.39
Clns1aQ61189 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Gm43799-201ENSMUST00000201845 579 ntBASIC12.6□□□□□ -0.39
Clns1aQ61189 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.6□□□□□ -0.39
Clns1aQ61189 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.6□□□□□ -0.39
Clns1aQ61189 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Clns1aQ61189 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clns1aQ61189 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.6□□□□□ -0.39
Clns1aQ61189 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.6□□□□□ -0.39
Clns1aQ61189 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Clns1aQ61189 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.59□□□□□ -0.39
Clns1aQ61189 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Gm9013-201ENSMUST00000132939 882 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms