Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.28■□□□□ 0.52
Irf9Q61179 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Irf9Q61179 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Irf9Q61179 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Gm6222-201ENSMUST00000120787 396 ntBASIC18.28■□□□□ 0.52
Irf9Q61179 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.28■□□□□ 0.52
Irf9Q61179 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Gm27680-201ENSMUST00000184192 160 ntBASIC18.28■□□□□ 0.52
Irf9Q61179 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Gm44344-201ENSMUST00000200287 129 ntBASIC18.28■□□□□ 0.52
Irf9Q61179 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.28■□□□□ 0.52
Irf9Q61179 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Gm9063-201ENSMUST00000223299 582 ntBASIC18.28■□□□□ 0.52
Irf9Q61179 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.28■□□□□ 0.52
Irf9Q61179 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf9Q61179 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.28■□□□□ 0.52
Irf9Q61179 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Irf9Q61179 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.27■□□□□ 0.52
Irf9Q61179 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Irf9Q61179 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Gm27631-201ENSMUST00000184163 466 ntBASIC18.27■□□□□ 0.52
Irf9Q61179 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.27■□□□□ 0.52
Irf9Q61179 Shd-206ENSMUST00000225145 998 ntBASIC18.27■□□□□ 0.52
Irf9Q61179 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf9Q61179 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Irf9Q61179 Sybu-209ENSMUST00000228639 4113 ntBASIC18.27■□□□□ 0.51
Irf9Q61179 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Irf9Q61179 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.26■□□□□ 0.51
Irf9Q61179 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.26■□□□□ 0.51
Irf9Q61179 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.26■□□□□ 0.51
Irf9Q61179 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Irf9Q61179 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Irf9Q61179 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.26■□□□□ 0.51
Irf9Q61179 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf9Q61179 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.25■□□□□ 0.51
Irf9Q61179 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Irf9Q61179 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Irf9Q61179 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.25■□□□□ 0.51
Irf9Q61179 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Irf9Q61179 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Mir8102-201ENSMUST00000184148 139 ntBASIC18.25■□□□□ 0.51
Irf9Q61179 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.25■□□□□ 0.51
Irf9Q61179 Gm7775-201ENSMUST00000218871 853 ntBASIC18.25■□□□□ 0.51
Irf9Q61179 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Irf9Q61179 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms