Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm21901-201ENSMUST00000189568 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm29424-201ENSMUST00000189716 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm28599-201ENSMUST00000189838 694 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21867-201ENSMUST00000189917 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm29269-201ENSMUST00000190087 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21722-201ENSMUST00000190153 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm28423-201ENSMUST00000190701 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21899-201ENSMUST00000190745 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21910-201ENSMUST00000191163 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21849-201ENSMUST00000191571 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm28678-201ENSMUST00000191593 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm20910-201ENSMUST00000193268 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21871-201ENSMUST00000194621 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm2451-201ENSMUST00000199447 999 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm10290-201ENSMUST00000200451 999 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-2Q5R1I4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gm8749-201ENSMUST00000117737 331 ntBASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gm9726-201ENSMUST00000180321 678 ntBASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gm46209-201ENSMUST00000217912 553 ntBASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms