Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5d-4Q5R1F6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Gm12008-201ENSMUST00000117791 755 ntBASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5d-4Q5R1F6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Gm13597-201ENSMUST00000121239 375 ntBASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms