Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm8749-201ENSMUST00000117737 331 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm9103-201ENSMUST00000119371 405 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm4899-201ENSMUST00000178708 719 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm21362-201ENSMUST00000194272 928 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 AV026068-213ENSMUST00000223675 1171 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Gm24589-201ENSMUST00000116692 94 ntBASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Gm7862-201ENSMUST00000121461 292 ntBASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Gm9726-201ENSMUST00000180321 678 ntBASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-3Q5R1E6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms