Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm8655-201ENSMUST00000221159 852 ntBASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm15165-201ENSMUST00000118140 502 ntBASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm15565-201ENSMUST00000118890 427 ntBASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm25016-201ENSMUST00000158399 131 ntBASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm17808-201ENSMUST00000200859 894 ntBASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms