Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Mir1668-201ENSMUST00000184114 107 ntBASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gm18421-201ENSMUST00000204122 625 ntBASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gm30025-201ENSMUST00000218555 728 ntBASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm11336-201ENSMUST00000118168 334 ntBASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm7213-201ENSMUST00000215977 950 ntBASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-3Q5R1C3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Gm29257-201ENSMUST00000186115 639 ntBASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms