Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Carlr-201ENSMUST00000181515 2574 ntBASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Gm1401-201ENSMUST00000122048 772 ntBASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Gm2272-201ENSMUST00000194903 582 ntBASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv4Q5R1A3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trdv4Q5R1A3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.15□□□□□ -0.47
Trdv4Q5R1A3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trdv4Q5R1A3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trdv4Q5R1A3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv4Q5R1A3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms