Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Gm9726-201ENSMUST00000180321 678 ntBASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Gm27301-201ENSMUST00000184012 127 ntBASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.52■□□□□ 0.4
Rnf20Q5DTM8 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.52■□□□□ 0.39
Rnf20Q5DTM8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Rnf20Q5DTM8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf20Q5DTM8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.52■□□□□ 0.39
Rnf20Q5DTM8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf20Q5DTM8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rnf20Q5DTM8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf20Q5DTM8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms