Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn2bQ56A07 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn2bQ56A07 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.58□□□□□ -0.08
Scn2bQ56A07 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Scn2bQ56A07 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn2bQ56A07 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Gm12350-201ENSMUST00000121208 462 ntBASIC14.57□□□□□ -0.08
Scn2bQ56A07 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.57□□□□□ -0.08
Scn2bQ56A07 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.57□□□□□ -0.08
Scn2bQ56A07 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn2bQ56A07 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.56□□□□□ -0.08
Scn2bQ56A07 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Gm37153-201ENSMUST00000193637 231 ntBASIC14.56□□□□□ -0.08
Scn2bQ56A07 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.56□□□□□ -0.08
Scn2bQ56A07 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.56□□□□□ -0.08
Scn2bQ56A07 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn2bQ56A07 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Gm13036-201ENSMUST00000117799 748 ntBASIC14.55□□□□□ -0.08
Scn2bQ56A07 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.55□□□□□ -0.08
Scn2bQ56A07 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Gm7787-201ENSMUST00000216858 688 ntBASIC14.55□□□□□ -0.08
Scn2bQ56A07 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms