Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx49Q4FZF3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Gm20445-201ENSMUST00000061905 565 ntBASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx49Q4FZF3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Gm12091-201ENSMUST00000146791 830 ntBASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Gm42612-201ENSMUST00000197986 623 ntBASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Gm43170-201ENSMUST00000199827 612 ntBASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Gm9908-201ENSMUST00000211534 448 ntBASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx49Q4FZF3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx49Q4FZF3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Ddx49Q4FZF3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx49Q4FZF3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx49Q4FZF3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Gm22189-201ENSMUST00000103822 86 ntBASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Gm5479-201ENSMUST00000160578 435 ntBASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx49Q4FZF3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms