Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Gm14042-201ENSMUST00000120139 833 ntBASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ckap2Q3V1H1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Gm14822-201ENSMUST00000122247 291 ntBASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Gm37935-201ENSMUST00000192012 982 ntBASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Chchd1-203ENSMUST00000224633 557 ntBASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap2Q3V1H1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gm25287-201ENSMUST00000103846 110 ntBASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gm22918-201ENSMUST00000103855 110 ntBASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Mir6990-201ENSMUST00000183724 91 ntBASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms