Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim80Q3V061 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim80Q3V061 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim80Q3V061 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trim80Q3V061 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim80Q3V061 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trim80Q3V061 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim80Q3V061 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trim80Q3V061 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim80Q3V061 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44357-201ENSMUST00000195897 142 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm19658-201ENSMUST00000196231 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44367-201ENSMUST00000196836 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44350-201ENSMUST00000197197 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44390-201ENSMUST00000197533 144 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44313-201ENSMUST00000198018 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44486-201ENSMUST00000198508 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44314-201ENSMUST00000199263 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44394-201ENSMUST00000199558 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44484-201ENSMUST00000199873 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44466-201ENSMUST00000200264 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm44359-201ENSMUST00000200671 138 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim80Q3V061 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim80Q3V061 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.24■□□□□ 0.03
Trim80Q3V061 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim80Q3V061 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim80Q3V061 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim80Q3V061 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim80Q3V061 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim80Q3V061 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.23■□□□□ 0.03
Trim80Q3V061 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim80Q3V061 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim80Q3V061 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms