Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim40Q3UWA4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim40Q3UWA4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.83□□□□□ -0.19
Trim40Q3UWA4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim40Q3UWA4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim40Q3UWA4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim40Q3UWA4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim40Q3UWA4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Gm44454-201ENSMUST00000198541 138 ntBASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim40Q3UWA4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Gm8318-201ENSMUST00000182954 872 ntBASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms